HPC software

2018-08-03T11:56:19Z

Kemszori(AT)uni-miskolc.hu:

The current version of software on specific machines might be higher than described here. We are encouraging all users to install other tools to be used on our servers if service AUP and license restrictions are respected.

{| class="wikitable" border="1" style="text-align:center;"

|-
!Software component
!Debrecen
!Pécs
!Szeged
!Budapest
!Budapest2
!Debrecen2,3 (Leo, Apollo)
!Miskolc
|-
| colspan=8| '''Compiler environment (compiler, debugger, profiler)'''
|-
| AMD [http://developer.amd.com/tools-and-sdks/cpu-development/x86-open64-compiler-suite/ compilers ((opencc, openf90, openf95))] || colspan=2|-||colspan=2|Available||colspan=3|-
|-
| Math. Library (AMD) [http://developer.amd.com/tools/cpu-development/amd-core-math-library-acml ACML] ||colspan=2|-||colspan=2|4.2.4||colspan=3|-
|-
| [http://sources.redhat.com/gdb/ GDB] || colspan=2|7|| colspan=2|7.0.1|| colspan=2|7.2||7.5
|-
| [http://gcc.gnu.org/ GNU compilers (gcc, g++, gfortran)]||4.3||4.1.2 || colspan=2|4.1.2, 4.4.4|| colspan=2|4.4.7|| 4.8.5
|-
| Gprof|| colspan=2|2.2|| colspan=2|2.17|| colspan=2|2.20|| 2.26.1
|-
| Intel [http://software.intel.com/en-us/articles/intel-composer-xe/ compilers (icc, ifort)], [http://software.intel.com/en-us/articles/intel-math-kernel-library-documentation/ MKL], [http://software.intel.com/en-us/articles/intel-mkl-link-line-advisor/ Linking] ||colspan=2|12.1.5 (composerxe-2011 Update 11) ||colspan=2|-|| colspan=3|16.0
|-
| [http://oprofile.sourceforge.net/ Oprofile] || colspan=3|- ||0.9.4||colspan=3|-
|-
| colspan=8|'''Libraries supporting parallel development'''
|-
| LAM-MPI ||colspan=2|- ||colspan=2|7.1.2||colspan=3|-
|-
| MPICH2 ||colspan=2|1.4||colspan=2|1.2||colspan=3|-
|-
| [http://openmp.org/ OpenMP]||colspan=2|2.5 (GNU), 3.0 (Intel)||colspan=2|2.5 (GNU), 2.5 (AMD) ||colspan=3|2.5 (GNU), 3.0 (Intel)
|-
| [http://www.open-mpi.org/ OpenMPI] ||1.4.2 ||1.3.2 ||colspan=2|1.4.3 || colspan=2|1.8.5||1.6.3
|-
| [http://www.csm.ornl.gov/pvm/ PVM] ||colspan=4|3.4.5 ||colspan=3|-
|-
| [http://videotorium.hu/hu/recordings/details/12291,Overview_and_usage_of_the_SGI_HPC_softwares_on_the_SGI_ICE_and_SGI_UV_supercomputers SGI Perf. Suite] ||colspan=2|Available||colspan=2|-||colspan=2|-||Available
|-
| SGI-MPI (MPT) ||colspan=2|2.04||colspan=2|-||colspan=2|-||2.13
|-
| PGI Compiler and Tools ||colspan=5|-|| 15.10 || -
|-
| colspan=8|'''Libraries supporting scientific work'''
|-
| AmberTool || 16 ||colspan=6|-
|-
| Atlas ||colspan=4|3.8.3||colspan=3|-
|-
| BLACS ||colspan=4|1.1 (OpenMPI, MPICH2) ||1.1 (OpenMPI Intel)||3.1.3||-
|-
| BLAS ||colspan=2|3.2.2 ||colspan=2|3||3.6.1||-||3
|-
| Boost||colspan=2|1.36||colspan=2|1.33||colspan=3|-
|-
| FFTW ||colspan=2|3.1.2 ||colspan=2|3.2.2||3.3.5 ||3.3.4||3.3.3
|-
| [http://www.gromacs.org/ Gromacs] ||colspan=2|4.5.4 ||colspan=2|4.5.5||-||5.1.4 ||4.6.2
|-
| GUILE ||colspan=2|1.8.5 ||colspan=2|-||colspan=2|-||1.8.8
|-
| HDF5 ||colspan=2|1.8.7||colspan=2|-||colspan=2|1.8.14||-
|-
| LAMMPS ||colspan=4|-||16.05.14 (Phi)||16.05.14 (GPU, Phi)||-
|-
| Lapack ||colspan=2|3.2.2 ||colspan=2|3 ||3.6.1 ||colspan=2|-
|-
| [http://www.maplesoft.com/ Maple] ||colspan=2| - ||colspan=2|18||-||2015||-
|-
| [https://wiki.niif.hu/index.php?title=NIIF_szuperszámítógépek_használata#Matlab_feladatok Matlab] ||colspan=2|7.13.0 (R2011b)|| colspan=2|-||-||R2015b||-
|-
| NetCDF ||4.1.3 ||- ||colspan=2|4.2.1.1||4.4.1||4.3.3.1||-
|-
| NumPy ||colspan=2|1.3||colspan=2|1.7.1||1.11.2 ||-||1.7.0
|-
| PETSc||colspan=4|-||3.7.4 Intel||colspan=2|-
|-
| Python||colspan=4|2.7.5||3.5.2||colspan=2|-
|-
| Octave ||colspan=2|3.4||colspan=2|3.0.5 ||colspan=3|-
|-
| Qt||colspan=2|3.3.8b, 4.6.2||colspan=2|3.3.6 ||colspan=3|-
|-
| R ||2.8.1, 3.2.0, 3.2.5(Intel) || 2.8.1 ||colspan=2|-||colspan=2|-||3.0.1
|-
| Scalapack||colspan=4|1.7.5||colspan=2|2.0.2||-
|-
| Scilab ||colspan=2|5.3.2||colspan=2|-||colspan=3|-
|-
| Scipy||colspan=4|0.12.0||0.18.1 ||colspan=2|-
|-
| Sun JRE ||colspan=2|1.6||colspan=2|-||colspan=1|-||1.8||1.7
|-
| Gaussian||colspan=3|09_REV_C.01||-||-||colspan=2|09_REV_D.01
|-
| colspan=8|'''Middleware'''
|-
| [http://www.nordugrid.org/arc/ ARC grid middleware] ||colspan=7|4.1.0 (A-REX, ARIS, clients))
|-
| colspan=8|'''Miscellaneous software'''
|-
| Emacs ||colspan=2|22.3||colspan=2|21.4||-||23.1.1||22.3.1
|-
| GNU Plot ||colspan=2|4.2.3 ||colspan=2|4||colspan=3|-
|-
| ImageMagick ||colspan=2|6.4.3 ||colspan=2|6.2.8||colspan=3|-
|-
| [http://www.virtualgl.org/About/TigerVNC Turbo VNC]||colspan=4|1.1||colspan=3|2
|-
| [http://www.blender.org/ Blender]||colspan=3|2.49||-||colspan=2|2.49||-
|-
| [http://www.virtualgl.org/ VirtualGL]||colspan=3|2.3.2||-||colspan=2|2.4||-
|-
| [http://www.paraview.org/ Paraview]||colspan=3|3.14.1||-||colspan=3|3.14.1
|-
| ffmpeg||colspan=2|-||colspan=2|0.4.9||colspan=3|-
|}

[[Kategória: HPC]]

Pro-M - Oktatási Üzletág - Wiki - Szerkesztő közreműködései [hu]

HPC software